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Advanced Search Results For "DATABASES"

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 "DATABASES"
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Approaches for enhancing the analysis of chemical space for drug discovery.

Publication Type:Academic Journal

Source(s):Expert opinion on drug discovery [Expert Opin Drug Discov] 2022 Jul; Vol. 17 (7), pp. 789-798. Date of Electronic Publication: 2022 Jun 05.

Abstract:Introduction: Chemical space is a general conceptual framework that addresses the diversity of molecules and it has various applications. Moreover, chemical space is a cornerstone of chemoinformatics. In response to the increase in the set of chemical ...

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HODD: A Manually Curated Database of Human Ophthalmic Diseases with Symptom Characteristics and Genetic Variants Towards Facilitating Quick and Definite Diagnosis.

Publication Type:Academic Journal

Source(s):Interdisciplinary sciences, computational life sciences [Interdiscip Sci] 2022 Jun; Vol. 14 (2), pp. 385-393. Date of Electronic Publication: 2021 Nov 30.

Abstract:Ophthalmic diseases are disorders that affect the eyes. Hundreds of causal genes and biological pathways have been reported to be closely correlated with ophthalmic diseases. However, these information are scattered across various resources, which has ...

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CGRdb2.0: A Python Database Management System for Molecules, Reactions, and Chemical Data.

Publication Type:Academic Journal

Source(s):Journal of chemical information and modeling [J Chem Inf Model] 2022 May 09; Vol. 62 (9), pp. 2015-2020. Date of Electronic Publication: 2021 Nov 29.

Abstract:This work introduces CGRdb2.0─an open-source database management system for molecules, reactions, and chemical data. CGRdb2.0 is a Python package connecting to a PostgreSQL database that enables native searches for molecules and reactions without compl...

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RESCRIPt: Reproducible sequence taxonomy reference database management.

Publication Type:Academic Journal

Source(s):PLoS computational biology [PLoS Comput Biol] 2021 Nov 08; Vol. 17 (11), pp. e1009581. Date of Electronic Publication: 2021 Nov 08 (Print Publication: 2021).

Abstract:Nucleotide sequence and taxonomy reference databases are critical resources for widespread applications including marker-gene and metagenome sequencing for microbiome analysis, diet metabarcoding, and environmental DNA (eDNA) surveys. Reproducibly gene...

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The European Bioinformatics Institute (EMBL-EBI) in 2021.

Publication Type:Academic Journal

Source(s):Nucleic acids research [Nucleic Acids Res] 2022 Jan 07; Vol. 50 (D1), pp. D11-D19.

Abstract:The European Bioinformatics Institute (EMBL-EBI) maintains a comprehensive range of freely available and up-to-date molecular data resources, which includes over 40 resources covering every major data type in the life sciences. This year's service upda...

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The 2022 Nucleic Acids Research database issue and the online molecular biology database collection.

Publication Type:Academic Journal

Source(s):Nucleic acids research [Nucleic Acids Res] 2022 Jan 07; Vol. 50 (D1), pp. D1-D10.

Abstract:The 2022 Nucleic Acids Research Database Issue contains 185 papers, including 87 papers reporting on new databases and 85 updates from resources previously published in the Issue. Thirteen additional manuscripts provide updates on databases most recent...

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Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022.

Publication Type:Academic Journal

Source(s):Nucleic acids research [Nucleic Acids Res] 2022 Jan 07; Vol. 50 (D1), pp. D27-D38.

Abstract:The National Genomics Data Center (NGDC), part of the China National Center for Bioinformation (CNCB), provides a family of database resources to support global research in both academia and industry. With the explosively accumulated multi-omics data a...

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GreenMolBD: Nature Derived Bioactive Molecules' Database.

Publication Type:Academic Journal

Source(s):Medicinal chemistry (Shariqah (United Arab Emirates)) [Med Chem] 2022; Vol. 18 (6), pp. 724-733.

Abstract:Background: One of the essential resources for developing new drugs are naturally derived biologically active lead compounds. Biomedical researchers and pharmaceutical companies are highly interested in these plant-derived molecules to develop the new ...

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DNA Data Bank of Japan (DDBJ) update report 2021.

Publication Type:Academic Journal

Source(s):Nucleic acids research [Nucleic Acids Res] 2022 Jan 07; Vol. 50 (D1), pp. D102-D105.

Abstract:The Bioinformation and DDBJ (DNA Data Bank of Japan) Center (DDBJ Center; https://www.ddbj.nig.ac.jp) operates archival databases that collect nucleotide sequences, study and sample information, and distribute them without access restriction to progres...

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MODOMICS: a database of RNA modification pathways. 2021 update.

Publication Type:Academic Journal

Source(s):Nucleic acids research [Nucleic Acids Res] 2022 Jan 07; Vol. 50 (D1), pp. D231-D235.

Abstract:The MODOMICS database has been, since 2006, a manually curated and centralized resource, storing and distributing comprehensive information about modified ribonucleosides. Originally, it only contained data on the chemical structures of modified ribonu...

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