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Advanced Search Results For "Genotype"

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Two novel human coronavirus OC43 genotypes circulating in hospitalized children with pneumonia in China.

Publication Type: Editorial & Opinion

Source(s): Emerging microbes & infections [Emerg Microbes Infect] 2022 Dec; Vol. 11 (1), pp. 168-171.


Abstract: HCoV-OC43 is one of the mildly pathogenic coronaviruses with high infection rates in common population. Here, 43 HCoV-OC43 related cases with pneumonia were reported, corresponding genomes of HCoV-OC43 were obtained. Phylogenetic analyses based on comp...

Accurate genome-wide phasing from IBD data.

Publication Type: Academic Journal

Source(s): BMC bioinformatics [BMC Bioinformatics] 2022 Nov 23; Vol. 23 (1), pp. 502. Date of Electronic Publication: 2022 Nov 23.


Abstract: As genotype databases increase in size, so too do the number of detectable segments of identity by descent (IBD): segments of the genome where two individuals share an identical copy of one of their two parental haplotypes, due to shared ancestry. We s...

Human genotype-to-phenotype predictions: Boosting accuracy with nonlinear models.

Publication Type: Academic Journal

Source(s): PloS one [PLoS One] 2022 Aug 31; Vol. 17 (8), pp. e0273293. Date of Electronic Publication: 2022 Aug 31 (Print Publication: 2022).

Abstract: Genotype-to-phenotype prediction is a central problem of human genetics. In recent years, it has become possible to construct complex predictive models for phenotypes, thanks to the availability of large genome data sets as well as efficient and scalab...

Linking large-scale genetic structure of three Argynnini butterfly species to geography and environment.

Publication Type: Academic Journal

Source(s): Molecular ecology [Mol Ecol] 2022 Aug; Vol. 31 (16), pp. 4381-4401. Date of Electronic Publication: 2022 Jul 15.

Abstract: Understanding which factors and processes are associated with genetic differentiation within and among species remains a major goal in evolutionary biology. To explore differences and similarities in genetic structure and its association with geographi...


Publication Type: Academic Journal

Source(s): JAPS: Journal of Animal & Plant Sciences. 2/28/2023, Vol. 33 Issue 1, p85-94. 10p.

Abstract: Plant breeders perform multi-environment yield trials to identify superior genotypes for a specific region and to partition the target region into different mega-environments. In this investigation, the GGE-biplot was used to evaluate 15 bread wheat ad...

Comprehensive Stability Analysis of Wheat Genotypes through Multi-Environmental Trials.

Publication Type: Academic Journal

Source(s): Journal of Agricultural Sciences. 2023, Vol. 29 Issue 1, p317-334. 18p.

Abstract: In rainfed areas, due to variable environmental factors, improving the yield stability of the introduced cultivars along with increasing yield should be considered. The main aim of this study is to obtain high-yield wheat genotypes that are stable and ...

Interpretable modeling of genotype-phenotype landscapes with state-of-the-art predictive power.

Publication Type: Academic Journal

Source(s): Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2022 Jun 28; Vol. 119 (26), pp. e2114021119. Date of Electronic Publication: 2022 Jun 21.

Abstract: Large-scale measurements linking genetic background to biological function have driven a need for models that can incorporate these data for reliable predictions and insight into the underlying biophysical system. Recent modeling efforts, however, prio...

Using genomic prediction with crop growth models enables the prediction of associated traits in wheat.

Publication Type: Academic Journal

Source(s): Journal of experimental botany [J Exp Bot] 2023 Mar 13; Vol. 74 (5), pp. 1389-1402.

Abstract: Crop growth models (CGM) can predict the performance of a cultivar in untested environments by sampling genotype-specific parameters. As they cannot predict the performance of new cultivars, it has been proposed to integrate CGMs with whole genome pred...

From individual behaviors to collective outcomes: fruiting body formation in Dictyostelium as a group-level phenotype.

Publication Type: Academic Journal

Source(s): Evolution; international journal of organic evolution [Evolution] 2023 Mar 01; Vol. 77 (3), pp. 731-745.

Abstract: Collective phenotypes, which arise from the interactions among individuals, can be important for the evolution of higher levels of biological organization. However, how a group's composition determines its collective phenotype remains poorly understood...

The effect of caffeine on exercise performance is not influenced by ADORA2A genotypes, alone or pooled with CYP1A2 genotypes, in adolescent athletes.

Publication Type: Academic Journal

Source(s): European journal of nutrition [Eur J Nutr] 2023 Mar; Vol. 62 (2), pp. 1041-1050. Date of Electronic Publication: 2022 Nov 16.

Abstract: Purpose: This study investigated the influence of the different genotypes of ADORA2A (1976 C > T, rs 5751876), alone or pooled with CYP1A2 (163 C > A rs 762551) genotypes, on the ergogenic effects of caffeine (CAF) on various aspects of physical perfor...