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Advanced Search Results For "ontology"

1 - 10 of 57,309 results for
 "ontology"
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The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development.

Publication Type:Academic Journal

Source(s):BMC bioinformatics [BMC Bioinformatics] 2022 Mar 22; Vol. 23 (1), pp. 99. Date of Electronic Publication: 2022 Mar 22.

Abstract:Background: Ontologies of precisely defined, controlled vocabularies are essential to curate the results of biological experiments such that the data are machine searchable, can be computationally analyzed, and are interoperable across the biomedical r...

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Patient safety classifications, taxonomies and ontologies: A systematic review on development and evaluation methodologies.

Publication Type:Academic Journal

Source(s):Journal of biomedical informatics [J Biomed Inform] 2022 Sep; Vol. 133, pp. 104150. Date of Electronic Publication: 2022 Jul 22.

Abstract:Introduction: Patient safety classifications/ontologies enable patient safety information systems to receive and analyze patient safety data to improve patient safety. Patient safety classifications/ontologies have been developed and evaluated using a ...

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Identification of missing hierarchical relations in the vaccine ontology using acquired term pairs.

Publication Type:Academic Journal

Source(s):Journal of biomedical semantics [J Biomed Semantics] 2022 Aug 13; Vol. 13 (1), pp. 22. Date of Electronic Publication: 2022 Aug 13.

Abstract:Background: The Vaccine Ontology (VO) is a biomedical ontology that standardizes vaccine annotation. Errors in VO will affect a multitude of applications that it is being used in. Quality assurance of VO is imperative to ensure that it provides accurat...

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Similarity Calculation, Enrichment Analysis, and Ontology Visualization of Biomedical Ontologies using UFO.

Publication Type:Academic Journal

Source(s):Current protocols [Curr Protoc] 2021 Apr; Vol. 1 (4), pp. e115.

Abstract:The rapid growth of biomedical ontologies observed in recent years has been reported to be useful in various applications. In this article, we propose two main-function protocols-term-related and entity-related-with the three most common ontology analy...

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1, 2, 3, GO! Venture beyond gene ontologies in plant evolutionary research.

Publication Type:Academic Journal

Source(s):American journal of botany [Am J Bot] 2021 Mar; Vol. 108 (3), pp. 361-365. Date of Electronic Publication: 2021 Mar 08.

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RDmap: a map for exploring rare diseases.

Publication Type:Academic Journal

Source(s):Orphanet journal of rare diseases [Orphanet J Rare Dis] 2021 Feb 25; Vol. 16 (1), pp. 101. Date of Electronic Publication: 2021 Feb 25.

Abstract:Background: The complexity of the phenotypic characteristics and molecular bases of many rare human genetic diseases makes the diagnosis of such diseases a challenge for clinicians. A map for visualizing, locating and navigating rare diseases based on ...

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Correlations Between Phenotypes and Biological Process Ontologies in Monogenic Human Diseases.

Publication Type:Academic Journal

Source(s):Interdisciplinary sciences, computational life sciences [Interdiscip Sci] 2020 Dec; Vol. 12 (4), pp. 547-554. Date of Electronic Publication: 2020 Oct 28.

Abstract:A substantial body of research is focused to improve the understanding of the relationship between genotypes and phenotypes. Genotype-phenotype studies have shown promise in improving disease diagnosis in humans and identification of specific clinical ...

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Matching biomedical ontologies with GCN-based feature propagation.

Publication Type:Academic Journal

Source(s):Mathematical biosciences and engineering : MBE [Math Biosci Eng] 2022 Jun 09; Vol. 19 (8), pp. 8479-8504.

Abstract:With an increasing number of biomedical ontologies being evolved independently, matching these ontologies to solve the interoperability problem has become a critical issue in biomedical applications. Traditional biomedical ontology matching methods are...

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Pattern-Based Logical Definitions of Prenatal Disorders Grounded on Dispositions.

Publication Type:Academic Journal

Source(s):Studies in health technology and informatics [Stud Health Technol Inform] 2022 May 25; Vol. 294, pp. 347-351.

Abstract:Biomedical ontologies define concepts having biomedical significance and the semantic relations among them. Developing high-quality and reusable ontologies in the biomedical domain is a challenging task. Pattern-based ontology design is considered a pr...

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An evidence-based lexical pattern approach for quality assurance of Gene Ontology relations.

Publication Type:Academic Journal

Source(s):Briefings in bioinformatics [Brief Bioinform] 2022 May 13; Vol. 23 (3).

Abstract:Gene Ontology (GO) is widely used in the biological domain. It is the most comprehensive ontology providing formal representation of gene functions (GO concepts) and relations between them. However, unintentional quality defects (e.g. missing or errone...

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